SimiCon: a web tool for protein–ligand model comparison through calculation of equivalent atomic contacts | Zendy

Manuel Rueda | Zendy; Vsevolod Katritch | Zendy; Eugene Raush | Zendy; Ruben Abagyan | Zendy

AI Assistant Blog Pricing

Home ZAIA Blog

Open Access

SimiCon: a web tool for protein–ligand model comparison through calculation of equivalent atomic contacts

Author(s) -

Manuel Rueda,

Vsevolod Katritch,

Eugene Raush,

Ruben Abagyan

Publication year - 2010

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btq504

Subject(s) - computer science , graphics , web server , web browser , software , identification (biology) , computer graphics , web application , computational science , world wide web , computer graphics (images) , the internet , operating system , biology , botany

SimiCon is a web server designed for an automated identification of equivalent protein-ligand atomic contacts in different conformational models of a complex. The contacts are computed with internal coordinate mechanics (ICM) software with respect to molecular symmetry and the results are shown in the browser as text, tables and interactive 3D graphics. The web server can be executed remotely without a browser to allow users to automate multiple calculations.

The content you want is available to Zendy users.

Already have an account? Click here to sign in.

Having issues? You can contact us here

Accelerating Research