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Savant: genome browser for high-throughput sequencing data
Author(s) -
Marc Fiume,
Vanessa Williams,
Andrew Brook,
Michael Brudno
Publication year - 2010
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btq332
Subject(s) - throughput , computer science , genome , dna sequencing , genome browser , computational biology , biology , genomics , genetics , dna , gene , operating system , wireless
The advent of high-throughput sequencing (HTS) technologies has made it affordable to sequence many individuals' genomes. Simultaneously the computational analysis of the large volumes of data generated by the new sequencing machines remains a challenge. While a plethora of tools are available to map the resulting reads to a reference genome, and to conduct primary analysis of the mappings, it is often necessary to visually examine the results and underlying data to confirm predictions and understand the functional effects, especially in the context of other datasets.

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