Picante: R tools for integrating phylogenies and ecology | Zendy

Steven W. Kembel | Zendy; Peter D. Cowan | Zendy; Matthew R. Helmus | Zendy; William K. Cornwell | Zendy; Hélène Morlon | Zendy; David D. Ackerly | Zendy; Simon P. Blomberg | Zendy; Campbell O. Webb | Zendy

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Picante: R tools for integrating phylogenies and ecology

Author(s) -

Steven W. Kembel,

Peter D. Cowan,

Matthew R. Helmus,

William K. Cornwell,

Hélène Morlon,

David D. Ackerly,

Simon P. Blomberg,

Campbell O. Webb

Publication year - 2010

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btq166

Subject(s) - r package , phylogenetic tree , trait , phylogenetic diversity , set (abstract data type) , license , open source , diversity (politics) , software package , computer science , software , biology , data science , ecology , evolutionary biology , sociology , programming language , anthropology , biochemistry , operating system , gene

Picante is a software package that provides a comprehensive set of tools for analyzing the phylogenetic and trait diversity of ecological communities. The package calculates phylogenetic diversity metrics, performs trait comparative analyses, manipulates phenotypic and phylogenetic data, and performs tests for phylogenetic signal in trait distributions, community structure and species interactions.

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