Open AccessPhybase: an R package for species tree analysis
Author(s) -
Liang Liu,
Lili Yu
Publication year - 2010
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btq062
Subject(s) - r package , tree (set theory) , computer science , phylogenetic tree , source code , sample (material) , code (set theory) , software package , population , programming language , software , mathematics , biology , combinatorics , biochemistry , chemistry , demography , set (abstract data type) , chromatography , sociology , gene
Phybase is an R package for phylogenetic analysis using species trees. It provides functions to read, write, manipulate, simulate, estimate, summarize and plot species trees, which contain not only the topology and branch lengths but also population sizes.
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