BicOverlapper: A tool for bicluster visualization | Zendy

Rodrigo Santamaría | Zendy; Roberto Therón | Zendy; Luis Quintales | Zendy

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BicOverlapper: A tool for bicluster visualization

Author(s) -

Rodrigo Santamaría,

Roberto Therón,

Luis Quintales

Publication year - 2008

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btn076

Subject(s) - visualization , computer science , computer graphics (images) , human–computer interaction , artificial intelligence

BicOverlapper is a tool to visualize biclusters from gene-expression matrices in a way that helps to compare biclustering methods, to unravel trends and to highlight relevant genes and conditions. A visual approach can complement biological and statistical analysis and reduce the time spent by specialists interpreting the results of biclustering algorithms. The technique is based on a force-directed graph where biclusters are represented as flexible overlapped groups of genes and conditions.

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