COMPARE, a multi-organism system for cross-species data comparison and transfer of information | Zendy

David Salgado | Zendy; Grégory Gimenez | Zendy; François Coulier | Zendy; Christophe Marcelle | Zendy

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COMPARE, a multi-organism system for cross-species data comparison and transfer of information

Author(s) -

David Salgado,

Grégory Gimenez,

François Coulier,

Christophe Marcelle

Publication year - 2007

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btm599

Subject(s) - organism , computer science , information transfer , transfer (computing) , computational biology , biology , genetics , parallel computing , telecommunications

COMPARE is a multi-organism web-based resource system designed to easily retrieve, correlate and interpret data across species. The COMPARE interface provides access to a wide array of information including genomic structure, expression data, annotations, pathways and literature links for human and three widely studied animal models (zebrafish, Drosophila and mouse). A consensus ortholog-finding pipeline combining several ortholog prediction methods allows accurate comparisons of data across species and has been utilized to transfer information from well studied organisms to more poorly annotated ones.

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