MutaGeneSys: estimating individual disease susceptibility based on genome-wide SNP array data | Zendy

Julia Stoyanovich | Zendy; Itsik Pe’er | Zendy

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MutaGeneSys: estimating individual disease susceptibility based on genome-wide SNP array data

Author(s) -

Julia Stoyanovich,

Itsik Pe’er

Publication year - 2007

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btm587

Subject(s) - snp , computational biology , genome , snp array , computer science , biology , genetics , single nucleotide polymorphism , genotype , gene

We present MutaGeneSys: a system that uses genome-wide genotype data to estimate disease susceptibility. Our system integrates three data sources: the International HapMap project, whole-genome marker correlation data and the Online Mendelian Inheritance in Man (OMIM) database. It accepts SNP data of individuals as query input and delivers disease susceptibility hypotheses even if the original set of typed SNPs is incomplete. Our system is scalable and flexible: it produces population, technology and confidence-specific predictions in interactive time.

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