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Construction of an open-access database that integrates cross-reference information from the transcriptome and proteome of immune cells
Author(s) -
Atsushi Hijikata,
Hiroshi Kitamura,
Yayoi Kimura,
Ryo Yokoyama,
Yuichi Aiba,
YanYuan Bao,
Shigeharu Fujita,
Koji Hase,
Shohei Hori,
Yasuyuki Ishii,
Osami Kanagawa,
Hiroshi Kawamoto,
Kazuya Kawano,
Haruhiko Koseki,
Masato Kubo,
Ai Kurita-Miki,
Tomohiro Kurosaki,
Kyoko Masuda,
Mitsumasa Nakata,
Keisuke Oboki,
Hiroshi Ohno,
Mariko Okamoto,
Yoshimichi Okayama,
Jiyang OWang,
Hirohisa Saito,
Takashi Saito,
Machie Sakuma,
Katsuaki Sato,
Kaori Sato,
Kenichiro Seino,
Ruka Setoguchi,
Yuki Tamura,
Masato Tanaka,
Masaru Taniguchi,
Ichiro Taniuchi,
Annabelle Teng,
Takeshi Watanabe,
Hiroshi Watarai,
Sho Yamasaki,
Osamu Ohara
Publication year - 2007
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btm430
Subject(s) - transcriptome , proteome , computer science , database , computational biology , immune system , world wide web , biology , bioinformatics , gene , gene expression , genetics
Although a huge amount of mammalian genomic data does become publicly available, there are still hurdles for biologists to overcome before such data can be fully exploited. One of the challenges for gaining biological insight from genomic data has been the inability to cross-reference transcriptomic and proteomic data using a single informational platform. To address this, we constructed an open-access database that enabled us to cross-reference transcriptomic and proteomic data obtained from immune cells.

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