Stochastic simulation GUI for biochemical networks | Zendy

Ravishankar R. Vallabhajosyula | Zendy; Herbert M. Sauro | Zendy

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Stochastic simulation GUI for biochemical networks

Author(s) -

Ravishankar R. Vallabhajosyula,

Herbert M. Sauro

Publication year - 2007

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btm231

Subject(s) - computer science , graphical user interface , mit license , software , license , interface (matter) , data mining , stochastic modelling , theoretical computer science , programming language , operating system , mathematics , statistics , bubble , maximum bubble pressure method

This article describes the development of a useful graphical user interface for stochastic simulation of biochemical networks which allows model builders to run stochastic simulations of their models and perform statistical analysis on the results. These include the construction of correlations, power-spectral densities and transfer functions between selected inputs and outputs.

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