ClusterDraw web server: a tool to identify and visualize clusters of binding motifs for transcription factors | Zendy

Dmitri Papatsenko | Zendy

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ClusterDraw web server: a tool to identify and visualize clusters of binding motifs for transcription factors

Author(s) -

Dmitri Papatsenko

Publication year - 2007

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btm047

Subject(s) - web server , computer science , identification (biology) , web site , range (aeronautics) , web application , world wide web , binding site , computational biology , data mining , biology , the internet , genetics , engineering , botany , aerospace engineering

ClusterDraw is a program aimed to identification of binding sites and binding-site clusters. Major difference of the ClusterDraw from existing tools is its ability to scan a wide range of parameter values and weigh statistical significance of all possible clusters, smaller than a selected size. The program produces graphs along with decorated FASTA files. ClusterDraw web server is available at the following URL: http://flydev.berkeley.edu/cgi-bin/cld/submit.cgi

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