BioNetBuilder: automatic integration of biological networks | Zendy

Iliana Avila-Campillo | Zendy; Kevin Drew | Zendy; John C. Lin | Zendy; David J. Reiss | Zendy; Richard Bonneau | Zendy

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BioNetBuilder: automatic integration of biological networks

Author(s) -

Iliana Avila-Campillo,

Kevin Drew,

John C. Lin,

David J. Reiss,

Richard Bonneau

Publication year - 2006

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btl604

Subject(s) - computer science , biological network , computational biology , biology

BioNetBuilder is an open-source client-server Cytoscape plugin that offers a user-friendly interface to create biological networks integrated from several databases. Users can create networks for approximately 1500 organisms, including common model organisms and human. Currently supported databases include: DIP, BIND, Prolinks, KEGG, HPRD, The BioGrid and GO, among others. The BioNetBuilder plugin client is available as a Java Webstart, providing a platform-independent network interface to these public databases.

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