SNP2NMD: A database of human single nucleotide polymorphisms causing nonsense-mediated mRNA decay | Zendy

Areum Han | Zendy; Woo-Yeon Kim | Zendy; Seongmin Park | Zendy

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SNP2NMD: A database of human single nucleotide polymorphisms causing nonsense-mediated mRNA decay

Author(s) -

Areum Han,

Woo-Yeon Kim,

Seongmin Park

Publication year - 2006

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btl593

Subject(s) - single nucleotide polymorphism , nonsense mediated decay , gene , nonsense , snp , genetics , biology , computational biology , genotype , rna , rna splicing

Elucidating the effects of genetic polymorphisms on genes and gene networks is an important step in disease association studies. We developed the SNP2NMD database for human SNPs (single nucleotide polymorphisms) that result in PTCs (premature termination codons) and trigger nonsense-mediated mRNA decay (NMD). The SNP2NMD Web interfaces provide extensive genetic information on and graphical views of the queried SNP, gene, and disease terms.

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