MetaQuant: a tool for the automatic quantification of GC/MS-based metabolome data | Zendy

Boyke Bunk | Zendy; Martin Kucklick | Zendy; Rochus Jonas | Zendy; Richard Münch | Zendy; Max Schobert | Zendy; Dieter Jahn | Zendy; Karsten Hiller | Zendy

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MetaQuant: a tool for the automatic quantification of GC/MS-based metabolome data

Author(s) -

Boyke Bunk,

Martin Kucklick,

Rochus Jonas,

Richard Münch,

Max Schobert,

Dieter Jahn,

Karsten Hiller

Publication year - 2006

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btl526

Subject(s) - computer science , sbml , java , source code , programming language , netcdf , operating system , markup language , open source , database , mit license , metabolome , microsoft windows , software , bioinformatics , xml , biology , metabolomics

MetaQuant is a Java-based program for the automatic and accurate quantification of GC/MS-based metabolome data. In contrast to other programs MetaQuant is able to quantify hundreds of substances simultaneously with minimal manual intervention. The integration of a self-acting calibration function allows the parallel and fast calibration for several metabolites simultaneously. Finally, MetaQuant is able to import GC/MS data in the common NetCDF format and to export the results of the quantification into Systems Biology Markup Language (SBML), Comma Separated Values (CSV) or Microsoft Excel (XLS) format.

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