Analysis of binding site similarity, small-molecule similarity and experimental binding profiles in the human cytosolic sulfotransferase family
Author(s) -
Rafaël Najmanovich,
Abdellah AllaliHassani,
Richard J. Morris,
Ludmila Dombrovsky,
Patricia W. Pan,
Masoud Vedadi,
A.N. Plotnikov,
A.M. Edwards,
C.H. Arrowsmith,
Janet M. Thornton
Publication year - 2007
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btl292
Subject(s) - small molecule , structural similarity , binding site , similarity (geometry) , sulfotransferase , molecule , plasma protein binding , computational biology , function (biology) , chemistry , biology , biochemistry , genetics , sulfation , computer science , organic chemistry , artificial intelligence , image (mathematics)
In the present work we combine computational analysis and experimental data to explore the extent to which binding site similarities between members of the human cytosolic sulfotransferase family correlate with small-molecule binding profiles. Conversely, from a small-molecule point of view, we explore the extent to which structural similarities between small molecules correlate to protein binding profiles.
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