A permissive secondary structure-guided superposition tool for clustering of protein fragments toward protein structure prediction via fragment assembly | Zendy

Gilad Wainreb | Zendy; Nurit Haspel | Zendy; Haim J. Wolfson | Zendy; Ruth Nussinov | Zendy

Open Access

A permissive secondary structure-guided superposition tool for clustering of protein fragments toward protein structure prediction via fragment assembly

Author(s) -

Gilad Wainreb,

Nurit Haspel,

Haim J. Wolfson,

Ruth Nussinov

Publication year - 2006

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btl098

Subject(s) - cluster analysis , computer science , fragment (logic) , protein secondary structure , sequence (biology) , similarity (geometry) , protein data bank (rcsb pdb) , matching (statistics) , protein structure prediction , algorithm , protein structure , data mining , artificial intelligence , biology , mathematics , genetics , image (mathematics) , biochemistry , statistics

Secondary-Structure Guided Superposition tool (SSGS) is a permissive secondary structure-based algorithm for matching of protein structures and in particular their fragments. The algorithm was developed towards protein structure prediction via fragment assembly.

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