The LCB Data Warehouse | Zendy

Adam Ameur | Zendy; Vladimir Yankovski | Zendy; Stefan Enroth | Zendy; Ola Spjuth | Zendy; Jan Komorowski | Zendy

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The LCB Data Warehouse

Author(s) -

Adam Ameur,

Vladimir Yankovski,

Stefan Enroth,

Ola Spjuth,

Jan Komorowski

Publication year - 2006

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btl036

Subject(s) - computer science , database , bioconductor , data warehouse , login , scripting language , plug in , service (business) , world wide web , operating system , biochemistry , chemistry , economy , economics , gene

The Linnaeus Centre for Bioinformatics Data Warehouse (LCB-DWH) is a web-based infrastructure for reliable and secure microarray gene expression data management and analysis that provides an online service for the scientific community. The LCB-DWH is an effort towards a complete system for storage (using the BASE system), analysis and publication of microarray data. Important features of the system include: access to established methods within R/Bioconductor for data analysis, built-in connection to the Gene Ontology database and a scripting facility for automatic recording and re-play of all the steps of the analysis. The service is up and running on a high performance server. At present there are more than 150 registered users.

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