Open AccessGUUGle: a utility for fast exact matching under RNA complementary rules including G–U base pairing
Author(s) -
Wolfgang Gerlach,
Robert Giegerich
Publication year - 2006
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btk041
Subject(s) - sequence (biology) , set (abstract data type) , computer science , rna , base pair , base (topology) , suffix , algorithm , pairing , nucleic acid secondary structure , computational biology , combinatorics , theoretical computer science , mathematics , genetics , biology , dna , physics , gene , mathematical analysis , linguistics , philosophy , programming language , superconductivity , quantum mechanics
RNA secondary structure analysis often requires searching for potential helices in large sequence data.
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