Pathway recognition and augmentation by computational analysis of microarray expression data | Zendy

Barbara Novak | Zendy; Ajay N. Jain | Zendy

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Pathway recognition and augmentation by computational analysis of microarray expression data

Author(s) -

Barbara Novak,

Ajay N. Jain

Publication year - 2005

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/bti764

Subject(s) - kegg , pathway analysis , biological pathway , context (archaeology) , computer science , computational biology , microarray analysis techniques , permutation (music) , visualization , data mining , gene , bioinformatics , biology , transcriptome , genetics , gene expression , paleontology , physics , acoustics

We present a system, QPACA (Quantitative Pathway Analysis in Cancer) for analysis of biological data in the context of pathways. QPACA supports data visualization and both fine- and coarse-grained specifications, but, more importantly, addresses the problems of pathway recognition and pathway augmentation.

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