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Knowledge-based computational search for genes associated with the metabolic syndrome
Author(s) -
Tsutomu Matsunaga,
Masaaki Muramatsu
Publication year - 2005
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/bti484
Subject(s) - gene , computer science , computational biology , subspace topology , matching (statistics) , metabolic syndrome , set (abstract data type) , bioinformatics , artificial intelligence , biology , genetics , diabetes mellitus , medicine , pathology , programming language , endocrinology
A methodology to search for genes associated with multifactorial diseases by integrating the large amount of accumulated knowledge is seriously needed. A comprehensive understanding derived from a holistic view of gene relationship structures can be gained from our proposed analysis called the cross-subspace analysis (CSA). In this analysis, gene objects are generated by machine learning using their term occurrence patterns in MEDLINE abstracts and the degree of relationship between gene objects is quantified by matching these patterns.

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