Computational analysis suggests that alternative first exons are involved in tissue-specific transcription in rice (Oryza sativa) | Zendy

Norton Kitagawa | Zendy; Takumi Washio | Zendy; Shinichi Kosugi | Zendy; Tomoya Yamashita | Zendy; Kenji Higashi | Zendy; Hiroshi Yanagawa | Zendy; K. Higo | Zendy; Kouji Satoh | Zendy; Yasuhiro Ohtomo | Zendy; T. Sunako | Zendy; K Murakami | Zendy; Keiko Matsubara | Zendy; Jun Kawai | Zendy; Piero Carninci | Zendy; Yoshihide Hayashizaki | Zendy; Shoshi Kikuchi | Zendy; Masaru Tomita | Zendy

Open Access

Computational analysis suggests that alternative first exons are involved in tissue-specific transcription in rice (Oryza sativa)

Author(s) -

Norton Kitagawa,

Takumi Washio,

Shinichi Kosugi,

Tomoya Yamashita,

Kenji Higashi,

Hiroshi Yanagawa,

K. Higo,

Kouji Satoh,

Yasuhiro Ohtomo,

T. Sunako,

K Murakami,

Keiko Matsubara,

Jun Kawai,

Piero Carninci,

Yoshihide Hayashizaki,

Shoshi Kikuchi,

Masaru Tomita

Publication year - 2005

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/bti253

Subject(s) - exon , intron , oryza sativa , alternative splicing , biology , gene , genetics , rna splicing , transcription (linguistics) , tandem exon duplication , computational biology , rna , linguistics , philosophy

Transcription start site selection and alternative splicing greatly contribute to diversifying gene expression. Recent studies have revealed the existence of alternative first exons, but most have involved mammalian genes, and as yet the regulation of usage of alternative first exons has not been clarified, especially in plants.

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