The carbohydrate sequence markup language (CabosML): an XML description of carbohydrate structures | Zendy

Norihiro Kikuchi | Zendy; Akihiko Kameyama | Zendy; Shingo Nakaya | Zendy; H. Ito | Zendy; Takashi Sato | Zendy; Takeshi Shikanai | Zendy; Y. Takahashi | Zendy; Hisashi Narimatsu | Zendy

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The carbohydrate sequence markup language (CabosML): an XML description of carbohydrate structures

Author(s) -

Norihiro Kikuchi,

Akihiko Kameyama,

Shingo Nakaya,

H. Ito,

Takashi Sato,

Takeshi Shikanai,

Y. Takahashi,

Hisashi Narimatsu

Publication year - 2004

Publication title -

computer applications in the biosciences

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1460-2059

pISSN - 0266-7061

DOI - 10.1093/bioinformatics/bti152

Subject(s) - markup language , computer science , xml , sequence (biology) , sgml , carbohydrate , computational biology , programming language , world wide web , chemistry , biology , xml database , biochemistry

Bioinformatics resources for glycomics are very poor as compared with those for genomics and proteomics. The complexity of carbohydrate sequences makes it difficult to define a common language to represent them, and the development of bioinformatics tools for glycomics has not progressed. In this study, we developed a carbohydrate sequence markup language (CabosML), an XML description of carbohydrate structures.

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