Simulation tools for biochemical networks: evaluation of performance and usability | Zendy

Antti Pettinen | Zendy; Tommi Aho | Zendy; OlliPekka Smolander | Zendy; Tiina Manninen | Zendy; Antti Saarinen | Zendy; Kaisa-Leena Taattola | Zendy; Olli YliHarja | Zendy; MarjaLeena Linne | Zendy

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Simulation tools for biochemical networks: evaluation of performance and usability

Author(s) -

Antti Pettinen,

Tommi Aho,

OlliPekka Smolander,

Tiina Manninen,

Antti Saarinen,

Kaisa-Leena Taattola,

Olli YliHarja,

MarjaLeena Linne

Publication year - 2004

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/bti018

Subject(s) - usability , computer science , software engineering , human–computer interaction

Simulation of dynamic biochemical systems is receiving considerable attention due to increasing availability of experimental data of complex cellular functions. Numerous simulation tools have been developed for numerical simulation of the behavior of a system described in mathematical form. However, there exist only a few evaluation studies of these tools. Knowledge of the properties and capabilities of the simulation tools would help bioscientists in building models based on experimental data.

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