BarleyExpress: a web-based submission tool for enriched microarray database annotations | Zendy

Xiaoyun Tang | Zendy; Li Shen | Zendy; Julie Dickerson | Zendy

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BarleyExpress: a web-based submission tool for enriched microarray database annotations

Author(s) -

Xiaoyun Tang,

Li Shen,

Julie Dickerson

Publication year - 2004

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/bti002

Subject(s) - microarray databases , computer science , gene chip analysis , annotation , database , microarray analysis techniques , web application , information retrieval , ontology , world wide web , microarray , data mining , biology , artificial intelligence , gene expression , gene , biochemistry , philosophy , epistemology

BarleyExpress is a web-based microarray experiment data submission tool for BarleyBase, a public data resource of Affymetrix GeneChip data for plants. BarleyExpress uses the Plant Ontology vocabularies and enhances the MIAME guidelines to standardize the annotation of microarray gene expression experiments. In addition, BarleyExpress provides explicit support for factorial experiment design and template loading methods to ease the submission process for large experiments.

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