EC_oligos: automated and whole-genome primer design for exons within one or between two genomes | Zendy

Shaolin Liu | Zendy; Nicholas A. Tinker | Zendy; Stephen J. Molnar | Zendy; Diane E. Mather | Zendy

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EC_oligos: automated and whole-genome primer design for exons within one or between two genomes

Author(s) -

Shaolin Liu,

Nicholas A. Tinker,

Stephen J. Molnar,

Diane E. Mather

Publication year - 2004

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/bth413

Subject(s) - executable , oligonucleotide , genome , primer (cosmetics) , computational biology , exon , biology , file transfer protocol , genetics , computer science , sequence (biology) , dna , programming language , gene , world wide web , chemistry , the internet , organic chemistry

EC_oligos designs oligonucleotides (oligos) from exons of annotated genomic sequence information. It can automatically and rapidly select oligos that are conserved between two sets of sequence data, and can pair up oligos for use as PCR primers. It can do this on a whole-genome scale and according to user-defined criteria.

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