The CRASSS plug-in for integrating annotation data with hierarchical clustering results | Zendy

Eugen Buehler | Zendy; Jeffrey R. Sachs | Zendy; Kui Shao | Zendy; Ansuman Bagchi | Zendy; Lyle Ungar | Zendy

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The CRASSS plug-in for integrating annotation data with hierarchical clustering results

Author(s) -

Eugen Buehler,

Jeffrey R. Sachs,

Kui Shao,

Ansuman Bagchi,

Lyle Ungar

Publication year - 2004

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/bth362

Subject(s) - plug in , computer science , java , cluster analysis , set (abstract data type) , annotation , hierarchical clustering , data mining , programming language , database , operating system , artificial intelligence

We describe an algorithm for finding the most statistically significant non-overlapping subtrees of a hierarchical clustering of gene expression data with respect to a set of secondary data labels on genes. The method is implemented as a Java plug-in for a commercial gene expression analysis program (GeneSpring).

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