The SRS 3D module: integrating structures, sequences and features
Author(s) -
Séan O’Donoghue,
Joachim Ernst Meyer,
Andrea Schafferhans,
Karsten Fries
Publication year - 2004
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/bth260
Subject(s) - login , uniprot , documentation , computer science , sequence (biology) , service (business) , protein data bank (rcsb pdb) , information retrieval , programming language , biology , operating system , economy , economics , gene , biochemistry , genetics
In this paper we present SRS 3D, a new service that allows users to easily and rapidly find all related structures for a given target sequence; structures can then be viewed together with sequences, alignments and sequence features (currently from UniProt, InterPro and PDB). Extensive user feedback confirms that SRS 3D is intuitive and useful especially for those not expert in structures.
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