Supervised cluster analysis for microarray data based on multivariate Gaussian mixture
Author(s) -
Yi Qu,
Shizhong Xu
Publication year - 2004
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/bth177
Subject(s) - cluster analysis , computer science , data mining , gene chip analysis , clustering high dimensional data , mixture model , support vector machine , artificial intelligence , heuristic , data set , correlation clustering , microarray analysis techniques , set (abstract data type) , pattern recognition (psychology) , machine learning , dna microarray , gene , gene expression , biology , biochemistry , programming language
Grouping genes having similar expression patterns is called gene clustering, which has been proved to be a useful tool for extracting underlying biological information of gene expression data. Many clustering procedures have shown success in microarray gene clustering; most of them belong to the family of heuristic clustering algorithms. Model-based algorithms are alternative clustering algorithms, which are based on the assumption that the whole set of microarray data is a finite mixture of a certain type of distributions with different parameters. Application of the model-based algorithms to unsupervised clustering has been reported. Here, for the first time, we demonstrated the use of the model-based algorithm in supervised clustering of microarray data.
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