Open AccessSite2genome: locating short DNA sequences in whole genomes
Author(s) -
Martin C. Frith,
Anason Halees,
Ulla Hansen,
Zhiping Weng
Publication year - 2004
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/bth094
Subject(s) - genome , context (archaeology) , computer science , computational biology , task (project management) , dna , dna sequencing , human genome , biology , genetics , gene , paleontology , management , economics
Many biological papers describe short, functional DNA sites without specifying their exact positions in the genome. We have developed a Web server that automates the tedious task of locating such sites in eukaryotic genomes, thus giving access to the context of rich annotations that are increasingly available for genome sequences.
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