The Jalview Java alignment editor | Zendy

Michèle Clamp | Zendy; James Cuff | Zendy; Stephen M. J. Searle | Zendy; Geoffrey J. Barton | Zendy

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The Jalview Java alignment editor

Author(s) -

Michèle Clamp,

James Cuff,

Stephen M. J. Searle,

Geoffrey J. Barton

Publication year - 2004

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btg430

Subject(s) - java , computer science , programming language

Multiple sequence alignment remains a crucial method for understanding the function of groups of related nucleic acid and protein sequences. However, it is known that automatic multiple sequence alignments can often be improved by manual editing. Therefore, tools are needed to view and edit multiple sequence alignments. Due to growth in the sequence databases, multiple sequence alignments can often be large and difficult to view efficiently. The Jalview Java alignment editor is presented here, which enables fast viewing and editing of large multiple sequence alignments.

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