Formalization of mouse embryo anatomy | Zendy

Albert Burger | Zendy; Duncan Davidson | Zendy; Richard Baldock | Zendy

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Formalization of mouse embryo anatomy

Author(s) -

Albert Burger,

Duncan Davidson,

Richard Baldock

Publication year - 2004

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btg400

Subject(s) - computer science , workflow , atlas (anatomy) , prolog , ontology , context (archaeology) , programming language , computational biology , biology , database , anatomy , paleontology , philosophy , epistemology

The Edinburgh Mouse Atlas and Gene Expression Database project has developed a digital atlas of mouse development to provide a spatio-temporal framework for spatially mapped data such as in situ gene expression and cell lineage. As part of this database, a mouse embryo anatomy ontology has been created. A formalization of this anatomy is required to document its precise semantics and how it is used in the context of the Mouse Atlas.

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