Annotation pattern of ESTs from Spodoptera frugiperda Sf9 cells and analysis of the ribosomal protein genes reveal insect-specific features and unexpectedly low codon usage bias | Zendy

I. Landais | Zendy; Mylène Ogliastro | Zendy; Kasuei Mita | Zendy; Junko Nohata | Zendy; M. LópezFerber | Zendy; Martine Duonor-Cérutti | Zendy; Toru Shimada | Zendy; Philippe Fournier | Zendy; G. Devauchelle | Zendy

Open Access

Annotation pattern of ESTs from Spodoptera frugiperda Sf9 cells and analysis of the ribosomal protein genes reveal insect-specific features and unexpectedly low codon usage bias

Author(s) -

I. Landais,

Mylène Ogliastro,

Kasuei Mita,

Junko Nohata,

M. LópezFerber,

Martine Duonor-Cérutti,

Toru Shimada,

Philippe Fournier,

G. Devauchelle

Publication year - 2003

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btg324

Subject(s) - biology , spodoptera , lepidoptera genitalia , genetics , expressed sequence tag , gene , codon usage bias , phylogenetics , sequence analysis , genome , botany , recombinant dna

A whole set of Expressed Sequence Tags (ESTs) from the Sf9 cell line of Spodoptera frugiperda is presented here for the first time. By this way we want to identify both conserved and specific genes of this pest species. We also expect from this analysis to find a class of protein sequences providing a tool to explore genomic features and phylogeny of Lepidoptera.

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