Batch mode generation of residue-based diagrams of proteins | Zendy

Fabien Campagne | Zendy; E. Bettler | Zendy; G. Vriend | Zendy; Harel Weinstein | Zendy

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Batch mode generation of residue-based diagrams of proteins

Author(s) -

Fabien Campagne,

E. Bettler,

G. Vriend,

Harel Weinstein

Publication year - 2003

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btg236

Subject(s) - residue (chemistry) , computer science , xml , data mining , computational biology , chemistry , biochemistry , biology , operating system

Residue-based diagrams of proteins are graphical representations that can be used in protein information systems. These diagrams make it possible to visually integrate different types of biological information. The approach has been used successfully for membrane proteins. We developed the Residue-based diagram generator to (i) make it possible to generate residue-based diagrams of proteins in a batch mode that is compatible with the needs of information system curators, (ii) allow the generation of residue-based diagrams for families of soluble proteins or domains.

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