POAVIZ: a Partial Order Multiple Sequence Alignment Visualizer | Zendy

Catherine S. Grasso | Zendy; Michael C. Quist | Zendy; Kevin Ke | Zendy; Christopher J. Lee | Zendy

AI Assistant Blog Pricing

Home ZAIA Blog

Open Access

POAVIZ: a Partial Order Multiple Sequence Alignment Visualizer

Author(s) -

Catherine S. Grasso,

Michael C. Quist,

Kevin Ke,

Christopher J. Lee

Publication year - 2003

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btg175

Subject(s) - multiple sequence alignment , sequence alignment , visualization , alignment free sequence analysis , sequence (biology) , computer science , structural alignment , sequence analysis , construct (python library) , computational biology , biology , artificial intelligence , peptide sequence , genetics , programming language , gene

POAVIZ creates a visualization of a multiple sequence alignment that makes clear the overall structure of how sequences match and diverge in the alignment. POAVIZ can construct visualizations from any multiple sequence alignment source (e.g. PIR and CLUSTAL formats), and is valuable for revealing complex branching structure (such as domains, large-scale insertions / deletions or recombinations), especially in partnership with the Partial Order Alignment (POA) multiple sequence alignment program.

The content you want is available to Zendy users.

Already have an account? Click here to sign in.

Having issues? You can contact us here

Accelerating Research