GoFish finds genes with combinations of Gene Ontology attributes | Zendy

Gabriel F. Berriz | Zendy; James V. White | Zendy; Oliver D. King | Zendy; Frederick P. Roth | Zendy

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GoFish finds genes with combinations of Gene Ontology attributes

Author(s) -

Gabriel F. Berriz,

James V. White,

Oliver D. King,

Frederick P. Roth

Publication year - 2003

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btg088

Subject(s) - gene ontology , gene , ontology , computer science , computational biology , genetics , biology , gene expression , philosophy , epistemology

GoFish is a Java application that allows users to search for gene products with particular gene ontology (GO) attributes, or combinations of attributes. GoFish ranks gene products by the degree to which they satisfy a Boolean query. Four organisms are currently supported: Saccaromyces cerevisiae, Caenorhabditis elegans, Drosophila melanogaster, and M.musculus.

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