KnowledgeEditor: a new tool for interactive modeling and analyzing biological pathways based on microarray data | Zendy

Tetsuro Toyoda | Zendy; Akihiko Konagaya | Zendy

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KnowledgeEditor: a new tool for interactive modeling and analyzing biological pathways based on microarray data

Author(s) -

Tetsuro Toyoda,

Akihiko Konagaya

Publication year - 2003

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btf874

Subject(s) - workbench , computer science , the internet , biological data , biological network , data mining , microarray analysis techniques , software , graphical model , artificial intelligence , computational biology , bioinformatics , programming language , visualization , world wide web , biology , biochemistry , gene expression , gene

KnowledgeEditor is a graphical workbench for biological experts to model biomolecular network graphs. The modeled network data are represented by SRML, and can be published via the internet with the help of plug-in module 'GSCope'. KnowledgeEditor helps us to model and analyze biological pathways based on microarray data. It is possible to analyze the drawn networks by simulating up-down regulatory cascade in molecular interactions.

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