Genoscapist: online exploration of quantitative profiles along genomes via interactively customized graphical representations | Zendy

Sandra Dérozier | Zendy; Pierre Nicolas | Zendy; Ulrike Mäder | Zendy; Cyprien Guérin | Zendy

Open Access

Genoscapist: online exploration of quantitative profiles along genomes via interactively customized graphical representations

Author(s) -

Sandra Dérozier,

Pierre Nicolas,

Ulrike Mäder,

Cyprien Guérin

Publication year - 2021

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btab079

Subject(s) - computer science , visualization , software deployment , source code , relevance (law) , graphical user interface , genome , code (set theory) , information retrieval , data mining , world wide web , biology , programming language , software engineering , genetics , gene , set (abstract data type) , political science , law

Genoscapist is a tool to design web interfaces generating high-quality images for interactive visualization of hundreds of quantitative profiles along a reference genome together with various annotations. Relevance is demonstrated by deployment of two websites dedicated to large condition-dependent transcriptome datasets available for Bacillus subtilis and Staphylococcus aureus.

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