Bacnet: a user-friendly platform for building multi-omics websites | Zendy

Loane Danès | Zendy; Nicolas Tchitchek | Zendy; Christophe Bécavin | Zendy

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Bacnet: a user-friendly platform for building multi-omics websites

Author(s) -

Loane Danès,

Nicolas Tchitchek,

Christophe Bécavin

Publication year - 2020

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btaa828

Subject(s) - computer science , construct (python library) , interface (matter) , user interface , graphical user interface , eclipse , world wide web , java , web application , user friendly , human–computer interaction , operating system , computer network , physics , bubble , astronomy , maximum bubble pressure method

To face up to the exponential growth of heterogeneous datasets of various organisms, we developed a user-friendly platform for building multi-omics websites, which is named Bacnet. This platform helps bioinformaticians to construct four key web interfaces: (i) an interactive genome viewer; (ii) an expression and protein atlas; (iii) an interface for analysis of co-expression network; (iv) an interface for exploring homolog presence. We believe our platform will help the bioinformaticians to construct personalized user interfaces dedicated to biologists studying non-reference organisms.

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