Accurate calling of homeoallelic genotypes of iSelect markers using inbred structured populations | Zendy

Rohan Shah | Zendy; Gabriel KeebleGagnère | Zendy; Alex Whan | Zendy

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Accurate calling of homeoallelic genotypes of iSelect markers using inbred structured populations

Author(s) -

Rohan Shah,

Gabriel KeebleGagnère,

Alex Whan

Publication year - 2020

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btaa295

Subject(s) - population , biology , genotype , genetic marker , allele , synteny , genetics , computer science , gene , genome , demography , sociology

Genetic map construction is a foundational step in the analysis of structured experimental populations. For markers that hybridize to several genetically similar locations, or where several alleles are present (such as in multiparental populations), current methods often discard the marker or incorrectly call the genotypes. These errors result in information loss, or incorrect genotypes that can corrupt map construction.

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