annonex2embl: automatic preparation of annotated DNA sequences for bulk submissions to ENA | Zendy

Michael Gruenstaeudl | Zendy

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annonex2embl: automatic preparation of annotated DNA sequences for bulk submissions to ENA

Author(s) -

Michael Gruenstaeudl

Publication year - 2020

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btaa209

Subject(s) - python (programming language) , computer science , metadata , workflow , software , sequence (biology) , dna sequencing , programming language , annotation , information retrieval , database , data mining , world wide web , dna , artificial intelligence , biology , genetics

The submission of annotated sequence data to public sequence databases constitutes a central pillar in biological research. The surge of novel DNA sequences awaiting database submission due to the application of next-generation sequencing has increased the need for software tools that facilitate bulk submissions. This need has yet to be met with the concurrent development of tools to automate the preparatory work preceding such submissions.

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