Open AccessXEMBL: distributing EMBL data in XML format
Author(s) -
Lichun Wang,
Jean-Jack M. Riethoven,
Alan J. Robinson
Publication year - 2002
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/18.8.1147
Subject(s) - common object request broker architecture , computer science , xml , database , efficient xml interchange , streaming xml , xml framework , world wide web , server , operating system
Data in the EMBL Nucleotide Sequence Database is traditionally available in a flat file format that has a number of known shortcomings. With XML rapidly emerging as a standard data exchange format that can address some problems of flat file formats by defining data structure and syntax, there is now a demand to distribute EMBL data in an XML format. XEMBL is a service tool that employs CORBA servers to access EMBL data, and distributes the data in XML format via a number of mechanisms.
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