CX, an algorithm that identifies protruding atoms in proteins | Zendy

Alessandro Pintar | Zendy; Oliviero Carugo | Zendy; Sándor Pongor | Zendy

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CX, an algorithm that identifies protruding atoms in proteins

Author(s) -

Alessandro Pintar,

Oliviero Carugo,

Sándor Pongor

Publication year - 2002

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/18.7.980

Subject(s) - protein data bank (rcsb pdb) , radius , volume (thermodynamics) , graphics , computer science , molecular graphics , measure (data warehouse) , atom (system on chip) , simple (philosophy) , algorithm , protein data bank , crystallography , source code , computational science , computer graphics , computer graphics (images) , protein structure , chemistry , physics , data mining , thermodynamics , programming language , stereochemistry , philosophy , computer security , biochemistry , epistemology , embedded system

A simple and fast algorithm is described that calculates a measure of protrusion (cx) for atoms in protein structures, directly useable with the common molecular graphics programs.

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