Open AccessDetecting hypermutations in viral sequences with an emphasis on G → A hypermutation
Author(s) -
Patrick P. Rose,
Bette Korber
Publication year - 2000
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/16.4.400
Subject(s) - somatic hypermutation , emphasis (telecommunications) , biology , genetics , computer science , computational biology , virology , b cell , antibody , telecommunications
This program compares sequence sets to a reference sequence, tallies G --> A hypermutations, and presents the results in various tables and graphs, which include dinucleotide context, summaries of all observed nucleotide changes, and stop codons introduced by hypermutation.
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