RRTree: Relative-Rate Tests between groups of sequences on a phylogenetic tree | Zendy

Marc RobinsonRechavi | Zendy; Dorothée Huchon | Zendy

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RRTree: Relative-Rate Tests between groups of sequences on a phylogenetic tree

Author(s) -

Marc RobinsonRechavi,

Dorothée Huchon

Publication year - 2000

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/16.3.296

Subject(s) - phylogenetic tree , weighting , tree (set theory) , biology , ansi c , outgroup , phylogenetics , evolutionary biology , software , computer science , genetics , combinatorics , mathematics , gene , programming language , paleontology , physics , acoustics

RRTree is a user-friendly program for comparing substitution rates between lineages of protein or DNA sequences, relative to an outgroup, through relative rate tests. Genetic diversity is taken into account through use of several sequences, and phylogenetic relations are integrated by topological weighting.

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