Open AccessNet Nearest Neighbor Analysis (NNNA) summarizes non-compensated dinucleotides within gene sequences
Author(s) -
Dorothy Lang
Publication year - 2000
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/16.3.212
Subject(s) - phylogenetic tree , computational biology , k nearest neighbors algorithm , sequence analysis , software , sequence (biology) , gene , genetics , biology , transfer rna , computer science , artificial intelligence , rna , programming language
Net Nearest Neighbor Analysis (NNNA) measures a previously unexamined aspect of dinucleotide frequency-the non-compensated, non-repetitive dinucleotides in a sequence. Non-compensated dinucleotides are those in excess of their corresponding reverse dinucleotides.
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