A new fourier transform approach for protein coding measure based on the format of the Z curve. | Zendy

Ming Yan | Zendy; Zheshuai Lin | Zendy; C T Zhang | Zendy

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A new fourier transform approach for protein coding measure based on the format of the Z curve.

Author(s) -

Ming Yan,

Zheshuai Lin,

C T Zhang

Publication year - 1998

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/14.8.685

Subject(s) - fourier transform , coding (social sciences) , algorithm , computer science , short time fourier transform , measure (data warehouse) , fast fourier transform , fourier analysis , mathematics , data mining , statistics , mathematical analysis

At the core of most protein gene-finding algorithms are the coding measures used to make a decision on coding/non-coding. Of the protein coding measures, the Fourier measure is one of the most important. However, due to the limited length of the windows usually used, the accuracy of the measure is not satisfactory. This paper is devoted to improving the accuracy by lengthening the sequence to amplify the periodicity of 3 in the coding regions.

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