How low can you go? Pushing the limits of low-input ChIP-seq
Author(s) -
John Arne Dahl,
Gregor D. Gilfillan
Publication year - 2017
Publication title -
briefings in functional genomics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.22
H-Index - 67
eISSN - 2041-2647
pISSN - 2041-2649
DOI - 10.1093/bfgp/elx037
Subject(s) - biology , chromatin immunoprecipitation , profiling (computer programming) , epigenetics , computational biology , chromatin , chip , dna sequencing , immunoprecipitation , genome , dna , genetics , gene , evolutionary biology , computer science , gene expression , telecommunications , promoter , operating system
In the past decade, chromatin immunoprecipitation sequencing (ChIP-seq) has emerged as the dominant technique for those wishing to perform genome-wide protein:DNA profiling. Owing to the tissue- and cell-type-specific nature of epigenetic marks, the field has been driven towards obtaining data from ever-lower cell numbers. In this review, we focus on the methodological developments that have lowered input requirements and the biological findings they have enabled, as we strive towards the ultimate goal of robust single-cell ChIP-seq.
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