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On the basis of a polymerase chain reaction-restriction fragment-length polymorphism analysis of the 16S-23S ribosomal DNA intergenic spacer, clinical isolates of Borrelia burgdorferi can be classified into 3 genotypes designated as RST1, RST2, and RST3. RST1 strains are the most pathogenic, and RST3 strains are the least pathogenic.

Association between Human Leukocyte Antigen Class II Alleles and Genotype ofBorrelia burgdorferiin Patients with Early Lyme Disease