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Nucleotide Sequences that Distinguish Oka Vaccine from Parental Oka and Other Varicella‐Zoster Virus Isolates
Author(s) -
Takele Argaw,
Jeffrey I. Cohen,
Michael Klutch,
Kristen Lekstrom,
Tetsushi Yoshikawa,
Yoshizo Asano,
Philip R. Krause
Publication year - 2000
Publication title -
the journal of infectious diseases
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.69
H-Index - 252
eISSN - 1537-6613
pISSN - 0022-1899
DOI - 10.1086/315335
Subject(s) - orfs , virology , biology , varicella zoster virus , virus , open reading frame , varicella vaccine , chickenpox vaccine , nucleic acid sequence , strain (injury) , coding region , genetics , gene , peptide sequence , antibody , immunization , anatomy
The sequences of approximately 34 kb from the 3' end of the varicella-zoster virus (VZV) Oka vaccine strain and the previously sequenced Dumas strain were compared. Sequence differences were noted in the coding sequences of several VZV open reading frames (ORFs), including ORFs 48, 51, 52, 55, 56, 58, 59, 60, 62, 64, and 68. Tests based on differences in the ORF62 gene and in the ORF64 poly-A region successfully distinguished the Oka vaccine strain from its wild-type parent and from other Japanese and US clinical isolates. These changes remained stable after passage of the virus in humans.

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