Smoothness within ruggedness: the role of neutrality in adaptation.
Author(s) -
Martijn A. Huynen,
Peter F. Stadler,
Walter Fontana
Publication year - 1996
Publication title -
proceedings of the national academy of sciences
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 5.011
H-Index - 771
eISSN - 1091-6490
pISSN - 0027-8424
DOI - 10.1073/pnas.93.1.397
Subject(s) - adaptation (eye) , neutral network , smoothness , biology , evolutionary biology , sequence (biology) , genetics , neutrality , sequence space , phenotype , genotype , rna , space (punctuation) , mutation , computational biology , statistical physics , computer science , gene , mathematics , physics , artificial intelligence , neuroscience , mathematical analysis , artificial neural network , pure mathematics , banach space , operating system , philosophy , epistemology
RNA secondary structure folding algorithms predict the existence of connected networks of RNA sequences with identical structure. On such networks, evolving populations split into subpopulations, which diffuse independently in sequence space. This demands a distinction between two mutation thresholds: one at which genotypic information is lost and one at which phenotypic information is lost. In between, diffusion enables the search of vast areas in genotype space while still preserving the dominant phenotype. By this dynamic the success of phenotypic adaptation becomes much less sensitive to the initial conditions in genotype space.
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