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A perfectly symmetric lac operator binds the lac repressor very tightly.
Author(s) -
John R. Sadler,
Henri Sasmor,
Joan L. Betz
Publication year - 1983
Publication title -
proceedings of the national academy of sciences
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 5.011
H-Index - 771
eISSN - 1091-6490
pISSN - 0027-8424
DOI - 10.1073/pnas.80.22.6785
Subject(s) - lac repressor , repressor , operator (biology) , lac operon , sequence (biology) , shift operator , base pair , dna , combinatorics , biology , genetics , compact operator , mathematics , gene , computer science , transcription factor , extension (predicate logic) , plasmid , programming language
A completely symmetric DNA segment has been constructed that binds the lactose repressor of Escherichia coli 10-fold more tightly than does the natural lactose operator sequence. This tight-binding operator is an inverted repeat of a 15-base-pair segment from the left half of the natural operator sequence, the inversion being about the point indicated by the arrow shown below: (sequence in text) where the upper sequence is the natural operator and the lower sequence is the symmetric operator. The increased affinity of repressor for this symmetric sequence supports the idea that the tetrameric repressor is designed for a two-module binding to DNA, presumably via two (or two pairs) of its identical subunits. The natural operator is apparently "flawed" by "incorrect" base pairs in the right operator half and by an "incorrect" spacing between the operator halves with respect to maximal repressor binding.

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